Sorry for your predicament. You probably need more specific information about all that Hyundai ...stuff. They maybe have a set procedure about replacing that sensor. Are you sure you didn't unsnap the shift linkage while working, if that is even possible? or maybe another connector?
The check engine light is probably related to one or the other problem. That year Accent, there might be an easy method to retrieve the trouble codes, but I don't know. Anyway, Autozone or any parts store will read codes for free with their hand held scanners.
SOURCE: installing new brake pads on 2000 hyundai Accent GL
REMOVAL 
1.
Remove the lower bolt and lift the caliper assembly up and secure it with a wire or some other retaining method.
2.
Remove the pads.
CAUTION: Do not depress the brake pedal while disassembling the pads
INSPECTION
1.
Check the pads for wear or oil contamination and replace, if necessary.
•
The pads for the right and left wheels should be replaced at the same time. Never "drop" or intermix brake pad sets.
•
All four pads must be replaced as a complete set.
•
When replacing the brake pad, check for deformation. When replacing the guide spring, use a new one or the used one after cleaning away foreign material.
2.
Check the pad for damage or deformation.
Brake pad thickness:
Standard value: 9 mm (0.354 in.)
Service limited value: 2 mm (0.0787 in.)
INSTALLATION
1.
Install the pad clips.
2.
Install the pads onto each pad clip.
3.
Insert the piston in the cylinder using the Special Tool (09581-11000).
4.
Install the new pads. The shims are attached to each pad as illustrated
Be careful so that the disc or pad isn't contaminated by grease.
5.
Install the bolt and tighten to the specified value.
Tightening torque
Guide rod bolt: 22~32 Nm(220~320 kgf·cm, 16~24 lb·ft)
SOURCE: 2000 Hyundai Accent GL check engine
i just replaced the timing belt, and asked the garage to look at the transmission for me because i thought i was experiencing some subtle shifting problems. they told me the transmission looked fine, but i needed a new filter and fluid. the engine light didnt turn on til a couple weeks later tho. does this sound like a new filter and fluid would fix this problem?
SOURCE: 2000 Hyundai Accent will suddenly stall and wont restart
Have someone check the idle sensor. I had to have mine replaced along with another that I don't remember which one is was.
SOURCE: 2005 corolla , check engine light on and car
Take your car to a Toyota dealership. Have them scan the car for trouble codes. If they come up with a P-2716 code, you need a new Engine Control Unit (the computer). If your car has under 80,000 miles on it, Toyota will replace it for free.
SOURCE: my check engine light on my 2001 hyundai accent gl
Most of the time they mean:
p0441 = Evaporative Emission System Incorrect Purge Flow
p0422 = Evaporative Emission Control System Leak Detected
(small leak)
MOre info at http://www.obd-codes.com/p0442
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