Transmision starts out in 1st shifts to 2nd then third but will not shift into overdrive , but once it reaches 3rd gear ,it stays there when you come to a stop . after that it will only shift manually between 2nd and 3rd

Sounds like your transmission is in limp mode. This is a fault mode in which the transmission either loses electrical power or the PCM deactivates all of the electronics. The transmission will default to max line pressure. The driver will have Reverse and 3rd, with manual 2nd available by putting the gearshift in 2 or 1 (doesn't matter). 1st, 4th, and TCC lockup will not be available. It will not hurt the car to drive it like this for short periods, but use manual 2nd to get the car moving, and be aware that the trans will generate more heat than normal while operating in limp-home mode due to increased torque converter slippage during 2nd gear starts and no lockup in 3rd gear.

The other from what you described, trans shifts 2nd to 3rd by itself in D or OD and locks the converter : ShiftA solenoid failed. Easy fix in the pan. Or a wiring problem from PCM to trans.. or PCM.

Thank you for using fixya and have your Safari scanned for the DTC codes that would indicate what issues your transmission is having to put you in to limp mode.